Cysteine-390 is the binding site of luminous substance with symplectin, a photoprotein from Okinawan squid, Symplectoteuthis oualaniensis

Symplectin is a photoprotein from a luminous squid, Symplectoteuthis oualaniensis. It has a luminous substrate, dehydrocoelenterazine (DCZ), linked through a thioether bond with a cysteine residue. We have proven the binding site of luminous substrate in symplectin by using an artificial analogue of DCZ, ortho-fluoro-DCZ (F-DCZ). F-DCZ-symplectin emitting strong blue light was reconstituted from apo-symplectin and F-DCZ. Proteolytic digestion of the reconstituted F-DCZ-symplectin afforded peptides including C(390)GLK-F-DCZ (amide), which was detected with a house assembled nano-LC-ESI-Q-TOF-MS. The chromo-peptide derived from the F-DCZ-symplectin after luminescence showed the lower molecular mass than that before the luminescence by 12 mass units, corresponding to the loss of one carbon atom upon emitting light. Thus, we have concluded that F-DCZ analogue binds to Cys390 in symplectin so as to emit light.     

多自旋态离子Co替代诱导La2/3Ca1/3MnO3体系的输运反常

利用具有多自旋态的Co离子进行Mn位替代,制备了La_2/3Ca_1/3Mn_1-xCo_xO₃ (0≤x≤0.15) 系列样品并研究了体系的结构和输运特性.结果表明,在替代范围内,样品呈现很好的单相结构,各晶格参数随替代量的增大而减小;Co替代导致体系出现电输运反常,具体表现为在居里温度T_C以下电阻-温度曲线的二次金属-绝缘转 关键词： Mn位替代 双峰现象 自旋结构 磁电阻效应     

Site preference and thermodynamic properties of R3Ni13-xCoxB2（R=Y,Nd and Sm）

This paper investigates the structural stability of intermetallics R3Ni13-xCoxB2(R=Y,Nd and Sm) with Nd 3 Ni 13 B 2-type structure and the site preferences of the transition element Co by using a series of interatomic pair potentials.The space group remains unchanged upon substitution of Co for Ni in R3Ni13-xCoxB2 and the calculated lattice constants are found to agree with reports in literatures.The calculated cohesive energy curves show that Co atoms substitute for Ni with a strong preference for the 3g sites and the order of site preference is 3g,4h and 6i.Moreover,the total and partial phonon densities of states are first evaluated for the R 3 Ni 13 B 2 compounds with the hexagonal Nd 3 Ni 13 B 2-type structure.     

GB1与金属离子相互作用的NMR研究

G群链球菌G蛋白的B1结构域——GB1蛋白,常被用作发展体外及体内基于顺磁核磁共振（NMR）的蛋白质结构测定方法的研究模型.为确保赝接触化学位移（PCS）、顺磁弛豫增强（PRE）等顺磁约束数据的准确性,了解GB1和金属离子,尤其是顺磁离子的相互作用非常必要.然而GB1和二价金属离子以及镧系金属离子的相互作用并不十分清楚.本文利用NMR波谱研究了GB1和镧系金属离子以及多种二价金属离子的相互作用.我们发现GB1和镧系金属离子之间存在弱特异性相互作用,和Mn²⁺、Cu²⁺以及Co²⁺等顺磁二价离子弱结合,但不与Ca²⁺、Mg²⁺以及Zn²⁺等抗磁二价离子结合.该研究表明在GB1上链接顺磁探针时,应使用与固有位点结合常数差异明显的顺磁标签以获取正确的PRE数据.     

十二烷基三甲基溴化铵在聚苯乙烯胶乳粒子上的吸附

实验测得C~1~2TAB在PS胶乳粒子表面的吸附等温线呈L型的二阶段吸附特征,这表明初始的C~1~2TA^+离子是将其季铵正电性头基吸引在PS链的负电性硫酸根端基上,并将碳氢链通过疏水相互作用吸附在PS链上。结合光子相关谱测得胶乳粒子流体力学半径R~H的变化,表明第I阶段围绕着这些初始吸附位的聚集吸附,产生平均聚集数为4.0的松散小聚集体,此时对应的浓度c/cmc=0.32是文献通常所指的临界表面胶团浓度csmc。其后的进一步聚集吸附最终生成了附着在PS链端基处且平均聚集数为19.5的球形吸附胶团。这一饱和吸附的结果增加了胶乳粒子在水溶液中的分散稳定性。     

Molecular modeling study of an abasic DNA undecamer duplex: d(GCGTGOGTGCG) · d(CGCACTCACGC)

Molecular mechanics calculations were performed with the JUMNA program on d(GCGTGOGTGCG) · d(CGCACTCACGC) where “O” is a modified abasic site: 3-hydroxy-2-(hydroxymethyl)tetrahydrofuran. From energy minimizations, for intrahelical or extrahelical positions of the unpaired thymine, various structures with different curvatures were obtained. Dynamical properties of this abasic sequence were also investigated through the controlled studies of DNA bending. Poisson-Boltzmann calculations were used to mimic the electrostatic effect of solvent on this sequence. The lowest energy structures show an acceptable agreement with experimental data. Received: 1 June 1998 / Accepted: 17 September 1998 / Published online: 10 December 1998     

牛血清白蛋白与十二烷基硫酸钠作用的机理

利用电动势法得到了牛血清白蛋白(BSA)与十二烷基硫酸钠(SDS)相互作用的结合等温线. 通过四阶导数紫外光谱法和荧光光谱法研究了相互作用过程中芳香族氨基酸残基微环境极性的变化. 通过研究发现, 随着SDS浓度的逐渐增大, SDS在BSA上的平均结合数(v)逐渐增大, 色氨酸(Trp)残基所处微环境的极性在减弱后保持基本不变, 酪氨酸残基所处微环境的极性在明显增强后稍有减弱, 苯丙氨酸残基所处微环境的极性略有增强. 结果表明, 当v由0增大到14时, SDS主要结合在BSA的Trp-213附近并逐渐形成聚集体, 从而诱导BSA由结构域ⅡA 开始逐渐展开. 此后, SDS呈正协同作用的特点与BSA 结合, v急剧增大. 当v约为302 时, SDS在BSA上的结合基本达到饱和, BSA的构象趋于稳定.     

The Site Symmetry of Eu~(3 ) in ZnS:Eu Nanoparticle

IntroductionNanosizedZnSmaterialsdopedornotdopedwithimpuritieshavebeenpreparedandstudiedl3.Chenandhiscoworkers4studiedandreportedthethermoluminescence(TL)ofZnSnanoparticles.TheyfoundthatboththeTLandthesurfacefluorescenceincreaseastheparticlesizeisdecreased,andtheTLisrelatedtothesurfacestates.Mn-dopedZnSnanoparticlesyieldthebestexternalphotoluminescentquantumefficiencyofabout18%atroomtemperatureandluminescentdecaytimeisatleastfiveordersofmagnitudefasterthanthatofthecorrespondingMn2 radiat…     

The Reactive Sites of Methane Activation: A Comparison of IrC3+ with PtC3+

The activation reactions of methane mediated by metal carbide ions MC₃⁺ (M = Ir and Pt) were comparatively studied at room temperature using the techniques of mass spectrometry in conjunction with theoretical calculations. MC₃⁺ (M = Ir and Pt) ions reacted with CH₄ at room temperature forming MC₂H₂⁺/C₂H₂ and MC₄H₂⁺/H₂ as the major products for both systems. Besides that, PtC₃⁺ could abstract a hydrogen atom from CH₄ to generate PtC₃H⁺/CH₃, while IrC₃⁺ could not. Quantum chemical calculations showed that the MC₃⁺ (M = Ir and Pt) ions have a linear M-C-C-C structure. The first C–H activation took place on the Ir atom for IrC₃⁺. The terminal carbon atom was the reactive site for the first C–H bond activation of PtC₃⁺, which was beneficial to generate PtC₃H⁺/CH₃. The orbitals of the different metal influence the selection of the reactive sites for methane activation, which results in the different reaction channels. This study investigates the molecular-level mechanisms of the reactive sites of methane activation.     

Photoluminescence of two thienylpyrrole polymers

Photoluminescence of two thienylpyrrole polymers, one containing three thiophene and one pyrrole rings in the repeat, and the other having four thiophene and one pyrrole rings in the repeat, were studied. The photoluminescence peaks were observed to shift with the change of the excitation frequencies. The shift in the peak position had a nearly linear dependence on the shift in the excitation frequency. This result showed that using different excitation frequencies optical gaps corresponding to different conjugation lengths were accessed, and, thus, the corresponding photoluminescence peaks were observed. © 1999 John Wiley & Sons, Inc. J Polym Sci B: Polym Phys 37: 461–464, 1999